Зміст “...Perspectives in Computational Genome Analysis -- The Sequence Reconstruction Problem -- Extracting Coevolving Characters from a Tree of Species -- When and How the Perfect Phylogeny Model Explains Evolution -- An Invitation to the Study of Brain Networks with Some Statistical Analysis of Thresholding Techniques -- Simplicial Models and Topological Inference in Biological Systems -- Combinatorial Insights into RNA Secondary Structure -- Redundant and Critical Noncovalent Interactions in Protein Rigid Cluster Analysis -- Modeling Autonomous Supramolecular Assembly -- The Role of Symmetry in Conformational Changes of Viral Capsids: A Mathematical Approach -- Minimal Tile and Bond-Edge Types for Self-Assembling DNA Graphs -- Programmed Genome Processing in Ciliates -- The Algebra of Gene Assembly in Ciliates -- Invariants of Graphs Modeling Nucleotide Rearrangements -- Introduction to DNA Topology -- Reactions Mediated by Topoisomerases and Other Enzymes: Modelling Localised DNA Transformations -- Site-Specific Recombination on Unknot and Unlink Substrates Producing Two-Bridge Links -- Site-Specific Recombination Modeled as a Band Surgery: Applications to Xer Recombination -- Understanding DNA Looping Through Cre-Recombination Kinetics -- The QSSA in Chemical Kinetics: As taught and as Practiced -- Algebraic Models and Their Use in Systems Biology -- Deconstructing Complex Nonlinear Models in System Design Space -- IBCell Morphocharts: A Computational Model for Linking Cell Molecular Activity with Emerging Tissue Morphology....”
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